Thursday, September 16, 2010

Science 2.0: trends, tools and tips (New workshop by @digicmb)



In September I will start a new course at the Central Medical Library called
"Science 2.0 : Trends, tools and tips" 
The intro to the course is: 


Science is changing. Science 2.0 influences the personal & workflow of researchers, clinicians and students. 
This workshop introduces new web-technologies and trends in communication, collaboration, searching, managing & sharing of information. 
Practical tips to improve your efficiency in work and/or study


The focus will be on:
  • searching and keeping up to date
  • managing your workflow
  • creating new stuff
  • communication and sharing
  • social networks for scientists

Monday, September 13, 2010

MedlinePlus Toolbar

The MedlinePLus Toolbar is the next toolbar in the range of the 9 NLM Toolbars currently available that is as good as finished. I think it's ready to go "beta" and see if people like it.

MedlinePLus Toolbar can be added to your browser as a whole, or in parts, as an app. 

New app: the Search cloud in Chrome as extension. Try it from:http://digicmb.blogspot.com/ orhttp://nlmtoolbars.blogspot.com/

To follow: the search widget as Chrome extension


Saturday, September 11, 2010

What do YOU want to CHANGE or ADD? 2010 PubMed Toolbar Survey

The Pubmed Toolbar can be downloaded via: http://pubmed.ourtoolbar.com
More info on it at: http://nlmtoolbars.blogspot.com
Create your free online surveys with SurveyMonkey, the world's leading questionnaire tool.

Friday, September 10, 2010

Emerging Technology in Medical and Health Information. MedLib's Round September 2010

The theme of this Round is: Emerging Technology in Medical and Health Information.

Due to a very low amount of submissions I feel obliged to write some post around the theme and the few submitted contributions.
I asked the colleagues specifically out there to post on the theme ánd comment on my Continuing Education Course (CEC) at EAHIl 2010 that was totally focussed on this theme, and help me that way keeping this public course up to date at :http://www.netvibes.com/emergingtechnologiesinlibraries.
The course touched emerging technology issues relevant for academic and medical libraries & librarians.

Is it the holidays? Do they not read my blog at all? :-) Is it too far from everybodies daily work? Too vague or abstract? I have been alerting for submissions on Twitter, Facebook and Linkedin, but maybe it is just bad timing.
You'll get a second chance ... (read the end of the post now)
For me this year, and a part of 2009 has been focussed on this topic, but not specifically limited to medical and health information. Technology is spreading and touching every sector of industry, business, education and even personal life. New technologies arising in one sector, can, to a growing extent, more and more easier applied to others. Working closely together with an academic library gives you, as medical librarian in a large teaching hospital an big advantage. Many medical librarians in Europe and in the world, work much more seperated. I had the privalige to be involved in organising a brand new conference focussing on these emerging technologies in academic libraries EMTACL10  with colleagues from NTNU UBit
Major topics there were:Mobile technologies, Linked data, Semantic Web, New literacies, Supporting research, Social Networks, Mash-ups and all the videos and presentations are still out there.
Here are the post that were submitted or selected by me for this Round


So, we have some interesting technologies presented in these posts:
  • Audience response systems (ARS) and Prezi
  • Location-based services
  • mobile applications
  • search and self-publishing tools


But there are so many more .... and many of us are wondering where to start (or to stop). At a meeting in Münster with a room full of German medical library directors ,we discussed what influence all these technologies could have on the library as organisation and on the staff for the future.
The results will be presented by Oliver Obst at the AGMB Tagung 2010, the national yearly meeting of German medical librarians.
You can get a good overview on existing technologies being used in academic libraries in:
Emerging Technologies for Academic Libraries in the Digital Age | by LiLi Li, Georgia Southern University, USA

Want to read more on what future technologies could hit our libraries? Read this:


Envisioning Future Academic Library ServicesInitiatives, ideas and challenges Sue McKnight, editor
ISBN: 978-1-85604-691-6
Or you can have a go at the high-quality presentations of the
Digital Libraries á la Carte 2010Tilburg University, the Netherlands, 26-30 July 2010 a whole week (5 days) modular course on digital libraries.
A few highlights are:


If you after reading this post, feel ready to contribute in any way .. write a comment or even better .. Submit your blog article to the next edition of medlib's round using our carnival submission form. Past posts and future hosts can be found on our blog carnival index page.

Monday, September 06, 2010

PubMed Toolbar Usage

Here are some recent stats about the usage of the PubMed Toolbar (875 downloads) in order of popularity:
  1. Search (direct search in all PubMed search tool): 44.16%
  2. Main Menu: 22.01%
  3. Messages: 4.26%
  4. News: 4.26%
  5. Other: 4.23%
  6. Using PubMed: 4.07%
  7. "Alt PubMeds": 4.02%
The number of daily users is still rising slowly. At the end of August 123 users at trhe same time was the higest use so far. This means 123 users had this PubMed Toolbar open in their browser and actually used it!
Don't want to use this Toolbar?
Read the following Post to do MORE with your Toolbars: 37 ways To Adjust Your NLM Toolbar (or any Conduit Toolbar) Try also the NLM Toolbar!

(This post is also published on the Blog about All NLM Toolbars)

Thursday, September 02, 2010

PubMed Linkout collection of Dutch Universities

Here's is a quick overview of Dutch Universities and their Linkout Collections in Pubmed:
With activated Linkout with XML:


Not (yet) activated Linkout via XML:
ALL DUTCH Libraries with Linkout


Results of the PubMed Search for ALL records with activated filters or via My NCBI Share link. 

DATE: September 2nd 2010
Why?: Because I updated the XML holdings file via Linkout ftp 24 hours ago.
RUGLinks is our SFX Linkresolver solution
The collection Dutch Medical Libraries Collection FULL Text is a the result of ALL DUTCH Linkout providers together in one search, saved & used as custom filter.





All Dutch Libraries using an OutSide Tool:
NETHERLANDS (total: 15)


  • Central Medical Library, UMCG & University of Groningen, The Netherlands (inlugrmlib)

  • GGZ Noord-en Midden Limburg, Wetenschappelijke Bibliotheek, The Netherlands (inlvvgilib)

  • Hanze Hogeschool Groningen (inlhhglib)

  • Hogeschool Utrecht, The Netherlands (inlhulib)

  • Maastricht University Library, Netherlands (inlmaulib)

  • Philips Research Library, Netherlands (inlprlib)

  • RIVM/PBL/NVI bibliotheek (inlrivmlib)

  • St. Elisabeth Ziekenhuis Medische Bibliotheek, The Netherlands (inlsezlib)

  • Synthon (inlsythlib)

  • Twente University Library (inlutwelib)

  • Universiteit Leiden Universiteitsbibliotheek, The Netherlands (inlullib)

  • University of Nijmegen Library (Radboud), NL (inlradulib)

  • University of Utrecht Library, The Netherlands (inluulib)

  • Vrije Universiteit Amsterdam (inlvulib)

  • Wageningen UR Library (inlwurlib)
  • Wednesday, September 01, 2010

    PubMed Updates : Linkout & Filters & New records

    The Central Medical Library offers a link-resolver (Outside Tool)in Pubmed (called RUGLInks), as well as a filter option (Linkout), to easily discover what content exactly is full-text available to our patrons.
    This is integrated and available in two ways:
    • by direct link to PubMed with MYNCBI-sharehttp://www.ncbi.nlm.nih.gov/sites/entrez?myncbishare=CMB&otool=inlugrmlib
      (This activates an clickable ICON (linkresolver) visible at any record viewed in detail, and it shows (in a clickable selection -filter-) what part of the search results is avaliable in full-text based on the library's licencing policy.
    • via MyNCBI Preferences via filtering search results, and setting LinkOut and outside tool preferences.
      (Patrons can activate their preferred Outside tool, as well as set a filter to show 
      what part of the search results is avaliable in full-text based on the library's licencing policy.)
    While working on a new PubMed Linkout xml file for the library to update the existing file, I was checking how many records the existing file was identifying as "our full-text" records. 
    Currently that is: 9.543.669. 
    The command to look that up is: loprovinlugrmlib[SB]


    Show all Pubmed Records (today Sept. 1st 2010),:  
    • All (20139180)
      (This uses the following command: publisher[sb] OR in process[sb] OR medline[sb] OR pubstatusnihms[All Fields] OR pubstatuspmcsd[All Fields] OR pmcbook[All Fields] OR pubmednotmedline[sb] OR oldmedline[sb] )
    activated to show via MyNCBI-share link and Outside Tool in base url:
    • Libraries (19.893.694) (this setting is now removed again from the settings You will not see it anymore)
      Observation: All libraries seem to got almost content of PubMed fulltext online available


    I just got confirmation from Linkout office that the new file has been processed and that the updates described in the file should appear in PubMed or related Entrez databases in 48 hours. So I will repeat that search after 48 hours and see if there is any change...


    In previous years it was a bit of a nuisance to create that file, as the output Ex-Libris/SFX supplied out of our SFX-database was not abled to merge our Embargo or multiple holdings into the desired "One line per ISSN". 
    So we had to "manually" correct that. But now after some updates and a bug-fix, it seems the output file that was delivered to me by Andre Keyzer of the University of Groningen Library .


    Soon more on the updates and on how to create/activate that XML file. Or on the question if it is useful to be abled to see constantly what has been added or changed status in Pubmed  via an rss feed?